How RNA Got Started: Scientists Look for the Origins of Life

May 13, 2009 RSS Feed Print
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By Solmaz Barazesh, Science News

Scientists may have figured out the chemistry that sparked the beginning of life on Earth.

The new findings map out a series of simple, efficient chemical reactions that could have formed molecules of RNA, a close cousin of DNA, from the basic materials available more than 3.85 billion years ago, researchers report online May 13 in Nature

“This is a very impressive piece of work — a really excellent analysis,” comments chemist James Ferris of the Rensselaer Polytechnic Institute in Troy, N.Y.

The new research lends support to the idea that RNA-based life-forms were the first step toward the evolution of modern life. Called the RNA world hypothesis, the idea was first proposed some 40 years ago. But until now, scientists couldn’t figure out the chemical reactions that created the earliest RNA molecules.

Today, DNA encodes the genetic blueprint for life — excluding some viruses, for those who consider viruses living — and RNA acts as an intermediary in the process, making protein from DNA. But most scientists think it’s unlikely that DNA was the basis of the origin of life, says study coauthor John Sutherland of the University of Manchester in England.

Information-bearing DNA holds the code needed to put proteins together, but at the same time, proteins catalyze the reactions that produce DNA. It’s a chicken-or-egg problem. Scientists don’t think that DNA and proteins could have come about independently — regardless of which came first — and yet still work together in this way.

It’s more plausible that the first life-forms were based on a single molecule that could replicate itself and store genetic information — a molecule such as RNA (SN: 4/7/01, p. 212). RNA world proponents speculate modern DNA and proteins evolved from this RNA-dominated early life, and RNA in cells today is left over from this early time.

While reactions to make RNA from ancient precursors worked on paper, the chemistry didn’t work in the lab. And some scientists thought even RNA molecules were too complex to have spontaneously formed in the primordial soup. Sutherland and his colleagues have shown the reactions are possible.

RNA molecules are formed from three components: a sugar, a base and a phosphate group. In past research, chemists developed each of the components and then tried to put them together to make the complete molecule. “But the components are quite stable, and so they wouldn’t stick together,” Sutherland says. “After 40 years of trying, we decided there had to be a better way of doing this reaction.”

The team took a different approach, starting with a common precursor molecule that had a bit of the sugar and the base. “Basically, we took half a base, added that to half a sugar, added the other piece of base, and so on,” Sutherland says. “The key turned out to be the order that the ingredients are added and the way you put them together — like making a soufflé.”

Another difference is that Sutherland and his team added the phosphate to the mix earlier than in past experiments. Having the phosphate around so early helped the later stages of the reaction happen more quickly and efficiently, the scientists say.

The starting materials and the conditions of the reaction are consistent with models of the geochemistry of an early Earth, the team says.

“But while this is a step forward, it’s not the whole picture,” Ferris points out. “It’s not as simple as putting compounds in a beaker and mixing it up. It’s a series of steps. You still have to stop and purify and then do the next step, and that probably didn’t happen in the ancient world.”

Sutherland and his team can so far make RNA molecules with two different bases, and there are still another two bases to figure out. “It’s related chemistry,” Sutherland says. “That’s how it must have been in the very beginning — a series of fundamental reactions that could make all four types of RNA molecule.”

Once those RNA molecules formed, they would have had to string together to make multiple letters of the code, which could then make proteins. Proteins could then make all the components that make up a cell, and the process would continue from there.

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Life IS INDEED An RNA World

Genomes Are RNAs'-Made Patterns-Manuals

"Repeats protect DNA"

http://www.the-scientist.com/blog/display/57135/

"More On Evolution In The Still RNA World"

http://www.the-scientist.com/community/posts/list/260/122.page#4818

Fitting together the pieces of the "still an RNA world" puzzle ?

- Rational probability and possibility that the initial, independent pre-biometabolism direct sunlight-fueled genes (life) were RNAs, who evolved their DNA-images as operational patterns-manuals libraries, and celled and genomed them. They most probably synthesized (and nucleusized) their DNAs manual libraries as their functional organs, to serve as their environmentally stabler than RNA, than themselves, works memory cores.

- Rational possibility that ALL RNAs represent the original archae-genes that since their (life) genesis have been and still are the primary actors, assessors, messengers, operators of all life processes.

- Rational possibility that the RNAs are the environmental feedback communicators to, and modifiers of, the genomes, that the RNAs are the effectors of the desirable biased genes expressions modifications, of enhanced energy constraining for survival.

Dov Henis

(Comments From The 22nd Century)

28Dec09 Implications Of E=Total[m(1 + D)]

http://www.the-scientist.com/community/posts/list/184.page#4587

Cosmic Evolution Simplified

http://www.the-scientist.com/community/posts/list/240/122.page#4427

Dov Henis 11:11AM February 09, 2010

On The Origin Of Origins

Dark Matter-Energy And “Higgs”?

Energy-Mass Superposition

The Fractal Oneness Of The Universe

All Earth Life Creates and Maintains Genes

A. On Energy, Mass, Gravity, Galaxies Clusters AND Life, A Commonsensible Recapitulation

http://www.the-scientist.com/community/posts/list/184.page#2125

The universe is the archetype of quantum within classical physics, which is the fractal oneness of the universe.

Astronomically there are two physics. A classical physics behaviour of and between galactic clusters, and a quantum physics behaviour WITHIN the galactic clusters.

The onset of big-bang's inflation, the cataclysmic resolution of the Original Superposition, started gravity, with formation - BY DISPERSION - of galactic clusters that behave as classical Newtonian bodies and continuously reconvert their original pre-inflation masses back to energy, thus fueling the galactic clusters expansion, and with endless quantum-within-classical intertwined evolutions WITHIN the clusters in attempt to delay-resist this reconversion.

B. Updated Life's Manifest May 2009

http://www.physforum.com/index.php?showtopic=14988&st=480&#entry412704

http://www.the-scientist.com/community/posts/list/140/122.page#2321

All Earth life creates and maintains Genes. Genes, genomes, cellular organisms - All create and maintain genes.

For Nature, Earth's biosphere is one of the many ways of temporarily constraining an amount of ENERGY within a galaxy within a galactic cluster, for thus avoiding, as long as possible, spending this particularly constrained amount as part of the fuel that maintains the clusters expansion.

Genes are THE Earth's organisms and ALL other organisms are their temporary take-offs.

For Nature genes are genes are genes. None are more or less important than the others. Genes and their take-offs, all Earth organisms, are temporary energy packages and the more of them there are the more enhanced is the biosphere, Earth's life, Earth's temporary storage of constrained energy. This is the origin, the archetype, of selected modes of survival.

The early genes came into being by solar energy and lived a very long period solely on solar energy. Metabolic energy, the indirect exploitation of solar energy, evolved at a much later phase in the evolution of Earth's biosphere.

However, essentially it is indeed so. All Earth life, all organisms, create and maintain the genes. Genes, genomes, cellular organisms - all create and maintain genes.

Dov Henis

(Comments from 22nd century)

Dov Henis 2:34PM July 12, 2009

Imagine all the "time" that came before us (and the "Big Bang"

for that matter) and all the "time" that will come hereafter.

We are all occupying the same nanosecond of existance and therefor share the same birth date and date of death of everyone

and everything that ever shared our existance. Atributing life to coincidences might seem improbable given that even the most rudimentary of life forms are so complex that the slightest error in their biology would be catastrophic to the organism's existance. However, in the infinite time available, is it logical to think common chance is accurate enough to get everthing so right and so perfect? Perhaps. Or is it more probable that there was an Intelligent hand that wrought this perfection and all the infinitely fine balances between the physical and biological relationships that we find all around us? Your turn now!

GW Bramhall of NY 2:22PM May 29, 2009

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